Root-mean-square deviation

Results: 401



#Item
361Protein methods / Stereochemistry / Molecular modelling / Conformational isomerism / De novo protein structure prediction / Protein structure prediction / Root-mean-square deviation / Protein folding / Alkane stereochemistry / Chemistry / Protein structure / Bioinformatics

SVNY330-Xu-Vol-II October 6, [removed]:19

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Source URL: www.ram.org

Language: English - Date: 2007-05-21 06:33:29
362Spectroscopy / Protein structure / Chemistry / Nuclear Overhauser effect / Root-mean-square deviation / Nuclear magnetic resonance spectroscopy / CING / STING / Statistics / Nuclear magnetic resonance / Science

KNOWLEDGE-BASED VERSUS EXPERIMENTALLY-ACQUIRED DISTANCE AND ANGLE CONSTRAINTS FOR NMR STRUCTURE REFINEMENT By Feng Cui Robert Jernigan

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Source URL: ima.umn.edu

Language: English - Date: 2011-10-06 10:33:10
363Science / Biology / Statistics / Root-mean-square deviation / Homology modeling / Protein structure prediction / Structural alignment / CASP / Sequence alignment / Bioinformatics / Protein methods / Protein structure

BMC Structural Biology BMC 2002,Structural Biology 2 BioMed Central

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Source URL: www.ram.org

Language: English - Date: 2005-12-27 20:37:26
364Protein methods / Computational phylogenetics / Structural alignment / Sequence alignment / Root-mean-square deviation / BLAST / Protein family / Protein structure prediction / STING / Bioinformatics / Science / Biology

16 STRUCTURE COMPARISON AND ALIGNMENT Marc A. Marti-Renom, Emidio Capriotti, Ilya N. Shindyalov, and Philip E. Bourne

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Source URL: www.sdsc.edu

Language: English - Date: 2009-05-21 13:20:04
365Science / Protein structure / Molecular biology / Molecular modelling / Protein methods / Root-mean-square deviation / Protein structure prediction / Docking / Interactome / Bioinformatics / Biology / Chemistry

proteins STRUCTURE O FUNCTION O BIOINFORMATICS A generalized knowledge-based discriminatory function for biomolecular interactions Brady Bernard1 and Ram Samudrala2*

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Source URL: www.ram.org

Language: English - Date: 2010-03-15 03:02:51
366Econometrics / Statistical inference / Parametric statistics / Turbidity / Mean squared error / Estimator / Minimum-variance unbiased estimator / Standard error / Root-mean-square deviation / Statistics / Estimation theory / Regression analysis

WATER RESOURCES RESEARCH, VOL. 32, NO. 7, PAGES[removed]; JULY[removed]Turbidity-controlled suspended sediment sampling for runoff-event load estimation Jack Lewis Pacific Southwest Research Station, U.S. Forest Service,

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Source URL: www.fs.fed.us

Language: English - Date: 2013-03-28 16:23:57
367Protein methods / Chemistry / Protein structure / Helices / Computational chemistry / Root-mean-square deviation / Protein structure prediction / Alpha helix / CASP / Bioinformatics / Statistics / Biology

Ab initio protein structure prediction results using a simple distance geometry-based method Enoch Huang1 Ram Samudrala2 and Jay Ponder1 1 Department of Biochemistry and Molecular Biophysics

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Source URL: www.ram.org

Language: English - Date: 2005-12-27 20:34:08
368Protein structure / Protein methods / Science / Statistics / Structural alignment / Homology modeling / Sequence alignment / Beta sheet / Root-mean-square deviation / Bioinformatics / Biology / Computational phylogenetics

PROTEINS: Structure, Function, and Genetics, Suppl. 1:43–[removed]Handling Context-Sensitivity in Protein Structures Using Graph Theory: Bona Fide Prediction Ram Samudrala1,2 and John Moult1* 1Center for Advanced Res

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Source URL: www.ram.org

Language: English - Date: 2005-12-27 20:33:09
369Statistics / Science / Protein methods / Stereochemistry / Computational chemistry / Protein structure prediction / Root-mean-square deviation / Protein secondary structure / Protein tertiary structure / Chemistry / Bioinformatics / Protein structure

PROTEINS: Structure, Function, and Genetics Suppl 3:194–[removed]Ab Initio Protein Structure Prediction Using a Combined Hierarchical Approach Ram Samudrala,1* Yu Xia,1 Enoch Huang,2 and Michael Levitt1 of Structura

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Source URL: www.ram.org

Language: English - Date: 2005-12-27 20:33:12
370Molecular modelling / Intermolecular forces / Protein structure / Force fields / Homology modeling / Implicit solvation / Root-mean-square deviation / Molecular dynamics / AMBER / Chemistry / Science / Computational chemistry

PROTEINS: Structure, Function, and Genetics 47:393– [removed]Increasing the Precision of Comparative Models with YASARA NOVA—a Self-Parameterizing Force Field Elmar Krieger,1 Gu ¨ nther Koraimann,2 and Gert Vrien

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Source URL: www.yasara.org

Language: English - Date: 2004-06-21 08:25:51
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